cdif_snp_code_mat: SNP Code matrix for the Cdif trehalose/severity data set

Description Usage Format

Description

A subset SNP code matrix to use as an example

Usage

1

Format

A matrix with 10,000 rows and 25 columns. Each row name corresponds to a variant. Each column corresponds to a sample.

snp_code_mat

The number in the code matrix indicates confidence and quality metrics. This particular data matrix is a subset of a matrix from: /nfs/turbo/umms-esnitkin/Project_Cdiff/Sequence_data/Project_propensity_score_match/consensus/2020_12_07_16_25_20_core_results/data_matrix/matrices


Snitkin-Lab-Umich/snitkitr documentation built on April 21, 2021, 10:48 a.m.