Man pages for Solatar/setR
| deepFilter | Filter the depmap annotation file for cell lines of interest. |
| deepPCA | Generate a PCA plot from DepMap data |
| deepResult | Get the results for a certain filter. |
| dmDep | CRISPR knockout dependency data from human cell lines |
| dmDrug | Information about cell lines featured in DepMap |
| dmExpr | Expression data from human cell lines |
| dmMeta | Information about cell lines featured in DepMap |
| dmProt | proteome data |
| hello | Hello, World! |
| setCGbase | create CGDS object |
| setCGclinic | get clinical data from patients with specific data about... |
| setCGstudy | get name of a study |
| setCGsurvival | get clinical data from patients with specific data about... |
| setCheck | Get the overlap between a list of genes and a list of gene... |
| setLoad | Load sets from a .gmt file |
| setMake | Create a gene set |
| setNet | Create an igraph from genes of interest and a list of gene... |
| setNetGSEA | Creating an igraph from genes of interest and a list of gene... |
| setNetInteract | Broken!!! should record interactive graph. Graph is... |
| setNetStyle | Enhancing an igraph originating from the seekNet function |
| setRead | Get identifiers from a differential expression table |
| setSave | Create a gene set |
| setShared | Get the overlap between sets |
