setSave: Create a gene set

In Solatar/setR:

Description

Imports: GSEABase, AnnotationDbi, limma

Usage

setSave(Sets, Folder, namePrefix = "geneset")

Arguments

Sets	list of genesets
Folder	string, complete folder path
namePrefix	string, some prefix that should make up the first part of the name

Value

Vector of human Entrez IDs (or, if matrix=T, a matrix of mouse and human Entrez IDs)

Examples

IDs1 <- setRead("up", path=myPath1)
IDs2 <- setRead("up", path=myPath2)
set1 <- setMake("mySet", IDs1, "Homo sapiens")
set2 <- setMake("mySet", IDs2, "Homo sapiens")
setSave(list(set1, set2), myFolder)

Solatar/setR documentation built on Dec. 5, 2020, 10:50 p.m.