StoreyLab/gcatest: Genotype Conditional Association TEST

GCAT is an association test for genome wide association studies that controls for population structure under a general class of trait models. This test conditions on the trait, which makes it immune to confounding by unmodeled environmental factors. Population structure is modeled via logistic factors, which are estimated using the `lfa` package.

Getting started

Package details

Bioconductor views DimensionReduction GenomeWideAssociation PrincipalComponent SNP
LicenseGPL (>= 3)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
StoreyLab/gcatest documentation built on Nov. 13, 2022, 4:22 a.m.