adonis.dispRity | adonis dispRity (from 'vegan::adonis') |
apply.NA | Apply inapplicable characters to a matrix. |
BeckLee | Beck and Lee 2014 datasets |
bhatt.coeff | Bhattacharrya Coefficient |
boot.matrix | Bootstraps and rarefies data. |
char.diff | Character differences |
check.morpho | Check a morphological matrix consistency levels. |
chrono.subsets | Separating data in chronological subsets. |
Claddis.ordination | Imports data from Claddis |
clean.data | Cleaning phylogenetic data |
combine.subsets | Combines or cleans subsets. |
crown.stem | Separates stem and crown species |
custom.subsets | Separating data into custom subsets. |
disparity | disparity |
dispRity | Calculates disparity from a matrix. |
dispRity.metric | Disparity metrics |
dispRity-package | Measuring Disparity in R |
dispRity.per.group | Disparity in different groups. |
dispRity.through.time | Disparity through time. |
dtt.dispRity | dtt dispRity (from 'geiger::dtt') |
extinction.subsets | Getting the time subsets from at and after an extinction... |
extract.dispRity | Extracting disparity values. |
fill.dispRity | Fills a 'dispRity' object. |
geomorph.ordination | Imports data from geomorph |
get.bin.ages | Get time bins ages |
get.contrast.matrix | Generates a contrast matrix. |
get.subsets | Extracts subsets from a dispRity object. |
make.dispRity | Creates a 'dispRity' object. |
make.metric | Creating disparity metrics |
matrix.dispRity | Fetching a matrix from a 'dispRity' object. |
nodes.coordinates | Nodes coordinates |
null.test | Testing a null hypothesis on multidimensional data. |
pair.plot | Plots pairwise comparisons |
plot.char.diff | Plots character differences |
plot.dispRity | dispRity object plotting |
print.dispRity | Prints a 'dispRity' object. |
random.circle | Random circle |
rescale.dispRity | Rescaling and centering disparity results. |
sim.morpho | Simulates morphological data. |
size.subsets | Size subsets. |
slice.tree | Time slicing a tree. |
sort.dispRity | Sorting or ordering a 'dispRity' object. |
space.maker | Creating multidimensional spaces |
summary.dispRity | dispRity object summary |
test.dispRity | Testing disparity hypotheses |
tree.age | Calculating the age of nodes and tips in a tree. |
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