Man pages for TGuillerme/dispRity
Measuring Disparity in R

adonis.dispRityadonis dispRity (from 'vegan::adonis')
apply.NAApply inapplicable characters to a matrix.
BeckLeeBeck and Lee 2014 datasets
bhatt.coeffBhattacharrya Coefficient
boot.matrixBootstraps and rarefies data.
char.diffCharacter differences
check.morphoCheck a morphological matrix consistency levels.
chrono.subsetsSeparating data in chronological subsets.
Claddis.ordinationImports data from Claddis
clean.dataCleaning phylogenetic data
combine.subsetsCombines or cleans subsets.
crown.stemSeparates stem and crown species
custom.subsetsSeparating data into custom subsets.
disparitydisparity
dispRityCalculates disparity from a matrix.
dispRity.metricDisparity metrics
dispRity-packageMeasuring Disparity in R
dispRity.per.groupDisparity in different groups.
dispRity.through.timeDisparity through time.
dtt.dispRitydtt dispRity (from 'geiger::dtt')
extinction.subsetsGetting the time subsets from at and after an extinction...
extract.dispRityExtracting disparity values.
fill.dispRityFills a 'dispRity' object.
geomorph.ordinationImports data from geomorph
get.bin.agesGet time bins ages
get.contrast.matrixGenerates a contrast matrix.
get.subsetsExtracts subsets from a dispRity object.
make.dispRityCreates a 'dispRity' object.
make.metricCreating disparity metrics
matrix.dispRityFetching a matrix from a 'dispRity' object.
nodes.coordinatesNodes coordinates
null.testTesting a null hypothesis on multidimensional data.
pair.plotPlots pairwise comparisons
plot.char.diffPlots character differences
plot.dispRitydispRity object plotting
print.dispRityPrints a 'dispRity' object.
random.circleRandom circle
rescale.dispRityRescaling and centering disparity results.
sim.morphoSimulates morphological data.
size.subsetsSize subsets.
slice.treeTime slicing a tree.
sort.dispRitySorting or ordering a 'dispRity' object.
space.makerCreating multidimensional spaces
summary.dispRitydispRity object summary
test.dispRityTesting disparity hypotheses
tree.ageCalculating the age of nodes and tips in a tree.
TGuillerme/dispRity documentation built on April 21, 2018, 7:24 p.m.