disparity: disparity

In TGuillerme/dispRity: Measuring Disparity

disparity

Description

An example of a dispRity object.

Format

one dispRity object.

Details

This matrix is based on the BeckLee dataset and split into seven continuous subsets (chrono.subsets). It was bootstrapped 100 times (boot.matrix) with four rarefaction levels. Disparity was calculated as the median of the centroids (dispRity).

See Also

BeckLee_disparity BeckLee

Examples

## Not run: 
## Loading the data
data(BeckLee_mat99)
data(BeckLee_tree)
data(BeckLee_ages)

## Creating the 7 subsets
subsets <- chrono.subsets(BeckLee_mat99, BeckLee_tree,
                          time = seq(from = 30, to = 90, by = 10),
                          method = "continuous", model = "ACCTRAN",
                          FADLAD = BeckLee_ages)

## Bootstrapping and rarefying
bootstraps <- boot.matrix(subsets, bootstraps = 100,
                          rarefaction = c(20, 15, 10, 5))

## Calculating disparity
disparity <- dispRity(bootstraps, metric = c(median, centroids))

## End(Not run)

TGuillerme/dispRity documentation built on Dec. 21, 2024, 4:05 a.m.