disparity | R Documentation |
An example of a dispRity
object.
one dispRity
object.
This matrix is based on the BeckLee
dataset and split into seven continuous subsets (chrono.subsets
).
It was bootstrapped 100 times (boot.matrix
) with four rarefaction levels.
Disparity was calculated as the median
of the centroids
(dispRity
).
BeckLee_disparity BeckLee
## Not run:
## Loading the data
data(BeckLee_mat99)
data(BeckLee_tree)
data(BeckLee_ages)
## Creating the 7 subsets
subsets <- chrono.subsets(BeckLee_mat99, BeckLee_tree,
time = seq(from = 30, to = 90, by = 10),
method = "continuous", model = "ACCTRAN",
FADLAD = BeckLee_ages)
## Bootstrapping and rarefying
bootstraps <- boot.matrix(subsets, bootstraps = 100,
rarefaction = c(20, 15, 10, 5))
## Calculating disparity
disparity <- dispRity(bootstraps, metric = c(median, centroids))
## End(Not run)
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