Files in TanerArslan/SubCellBarCode
SubCellBarCode: Integrated workflow for robust mapping and visualizing whole human spatial proteome
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/.Rapp.history
R/MarkerProteins.R
R/applyThresholdToCompartment.R
R/applyThresholdToNeighborhood.R
R/calRowMean.R
R/candidateRelocatedProteins.R
R/compareCls.R
R/convert2symbol.R
R/coveredMarkerProtein.R
R/hcc827Ctrl.R
R/hcc827CtrlPSMCount.R
R/hcc827GEF.R
R/hcc827GEFClass.R
R/hcc827GefPSMCount.R
R/hcc827exon.R
R/load.data.R
R/markerQualityControl.R
R/mergeCompNeigh.R
R/mergeProbability.R
R/plotBarcode.R
R/plotMultipleProtein.R
R/probabilityThresholdCompartments.R
R/probabilityThresholdNeighborhood.R
R/replacePrediction.R
R/sankeyPlot.R
R/sumProbability.R
R/svmClassifier.R
R/svmExternalData.R
R/tSNEVisualization.R
data/hcc827Ctrl.rda
data/hcc827CtrlPSMCount.rda
data/hcc827GEF.rda
data/hcc827GEFClass.rda
data/hcc827GefPSMCount.rda
data/hcc827exon.rda
data/markerProteins.rda
man/applyThresholdCompartment.Rd
man/applyThresholdNeighborhood.Rd
man/calRowMean.Rd
man/calculateCoveredProtein.Rd
man/candidateRelocatedProteins.Rd
man/compareCls.Rd
man/computeThresholdCompartment.Rd
man/computeThresholdNeighborhood.Rd
man/convert2symbol.Rd
man/hcc827Ctrl.Rd
man/hcc827CtrlPSMCount.Rd
man/hcc827GEF.Rd
man/hcc827GEFClass.Rd
man/hcc827GefPSMCount.Rd
man/hcc827exon.Rd
man/loadData.Rd
man/markerProteins.Rd
man/markerQualityControl.Rd
man/mergeCls.Rd
man/mergeProbability.Rd
man/plotBarcode.Rd
man/plotMultipleProtein.Rd
man/replacePrediction.Rd
man/sankeyPlot.Rd
man/sumProbability.Rd
man/svmClassification.Rd
man/svmExternalData.Rd
man/tsneVisualization.Rd
vignettes/SubCellBarCode.Rmd
