convert2symbol: Convert identifier to gene symbol

In TanerArslan/SubCellBarCode: SubCellBarCode: Integrated workflow for robust mapping and visualizing whole human spatial proteome

Description

Identifier for each feature should be converted into gene symbols unless they are not gene symbols

Usage

convert2symbol(df, id = "UNIPROT")

Arguments

df	data.frame; fractionated proteomics data where data contains 10 columns of duplicated 5 fractionations and rownames must be identifier e.g. UNIPROT, Entrez ID
id	caharacter; identifier id for each protein

Value

df

Examples

{

df <- data.frame(Uniprot = c("A4D0S4","A8TX70","O00305","O00337"),
Organism = rep("Homo Sap.", 4))

rownames(df) <- df$Uniprot
}

TanerArslan/SubCellBarCode documentation built on June 7, 2021, 9 a.m.