MakeDotPlotMatrix: Make matrix for PlotDotPlot function

In TeamPerie/CellDestiny: An RShiny application for the visualization and analysis of single cell lineage-tracing data

Make matrix for PlotDotPlot function

Description

Make matrix for PlotDotPlot function

Usage

MakeDotPlotMatrix(
  matrixWide,
  metadata,
  indivVar,
  indivVal,
  xVar,
  xVal,
  yVar,
  yVal,
  colorVar = "",
  transformation = "arcsin"
)

Arguments

matrixWide,	a barcode count matrix
metadata,	the metadata
indivVar,	individual variable name
indivVal,	wanted individuals
xVar,	x axis variable
xVal,	x axis values
yVar,	y axis variable
yVal,	y axis values
colorVar,	color variable as column in the matrix
transformation,	transformation to use, default is "arcsin". Other is "log10"

Value

a matrix

TeamPerie/CellDestiny documentation built on July 4, 2022, 8:40 a.m.