build_default_variable_list: Build default binaries config

In TearsWillFall/ULPwgs: An implementation of a wrapper for estimating tumor fraction in ultra-low-pass whole genome sequencing (ULP-WGS) for cell-free DNA in GNU/Unix based systems

Build default binaries config

Description

Build default binaries config

Build default references

Usage

build_default_variable_list(
  def_args = list(subtypes = list(overwrite = NULL, verbose = NULL, rmode = NULL,
    threads = NULL, await = NULL, lic_dir = "path", batch_cfg = NULL, preserve = NULL,
    compl = NULL, rds = NULL, work_dir = "path", output_dir = "path"), types =
    list(overwrite = "logical", verbose = "logical", rmode = "character", threads =
    "double", await = "logical", lic_dir = "character", batch_cfg = "character", preserve
    = "character", compl = "character", rds = "list", work_dir = "character", output_dir
    = "character"))
)

build_default_variable_list(
  def_args = list(subtypes = list(overwrite = NULL, verbose = NULL, rmode = NULL,
    threads = NULL, await = NULL, lic_dir = "path", batch_cfg = NULL, preserve = NULL,
    compl = NULL, rds = NULL, work_dir = "path", output_dir = "path"), types =
    list(overwrite = "logical", verbose = "logical", rmode = "character", threads =
    "double", await = "logical", lic_dir = "character", batch_cfg = "character", preserve
    = "character", compl = "character", rds = "list", work_dir = "character", output_dir
    = "character"))
)

Arguments

variables	List with variable names
arg_types	List with reference files

TearsWillFall/ULPwgs documentation built on April 18, 2024, 3:45 p.m.