API for TearsWillFall/tfProfiling
An implementation of PeterUlz (https://github.com/PeterUlz/TranscriptionFactorProfiling) TranscriptionFactorProfiling pipeline in R for GNU/Unix based systems
| Global functions | |
|---|---|
| %>% | Man page |
| accessibility_score | Man page Source code |
| analyze_tfbs_around_position | Man page Source code |
| analyze_tfs | Man page Source code |
| calculate_coverage_around_gp | Man page Source code |
| calculate_coverage_tfbs | Man page Source code |
| calculate_genowide_coverage | Man page Source code |
| char2seed | Man page Source code |
| find_peaks | Man page |
| get_coverage_bed | Man page Source code |
| get_high_signal | Man page Source code |
| get_low_signal | Man page Source code |
| get_mean_and_conf_intervals | Man page Source code |
| get_mean_coverage | Man page Source code |
| get_norm_local_coverage | Man page Source code |
| install_required_tools | Man page Source code |
| plot_freq_decomposition | Man page Source code |
| plot_motif_coverage | Man page Source code |
| rank_accessibility | Man page Source code |
