R/install_required_tools.R

In TearsWillFall/tfProfiling: An implementation of PeterUlz (https://github.com/PeterUlz/TranscriptionFactorProfiling) TranscriptionFactorProfiling pipeline in R for GNU/Unix based systems

#' Installs all the required tools for the analysis.
#'
#' This function downloads and compiles the source files of all the
#' tools needed for the ULP-WGS analysis. However, it DOESN'T provide
#' all the libraries and dependencies necessary for their succesful installation,
#' therefore, they have to be installed beforehand as described in the README.md
#' or at https://github.com/TearsWillFall/tfProfiling.
#' @export


install_required_tools=function(){
  BTools::install_tools(whitelist=c("bedtools","samtools"))
}