read_optim_results: Read results of the model optimisation

In TheoPannetier/DDvTDtools: Compare diversity-dependent (DD) and time-dependent (TD) diversification models

Description

Reads a result dataframe produced by run_optim(). The file is expedcted to be found in DDvTD/data/optim/ and have the default name computed by run_optim().

Usage

read_optim_results(
  sim,
  optim,
  para,
  init_k = get_init_k()[which(names(get_init_k()) == para)]
)

Arguments

sim	character, name of the simulation model, either "DD" or "TD".
optim	character, name of the optimisation model, either "DD" or "TD".
para	numeric, a four-digits number coding for a set of four parameter values. Refer to arg_para() doc for details, and call arg_para() to see possible inputs.
init_k	character code specifying the initial values of parameter K used in the optimisation. Refer to arg_init_k() doc for details, and call arg_init_k() to see possible inputs.

Author(s)

Theo Pannetier

TheoPannetier/DDvTDtools documentation built on Oct. 22, 2020, 2:31 p.m.