fixationBias: Bias Correction

In ThomasTaus/poolSeq: Simulate and Analyze Pool-seq Data

Description

fixationBias computes the bias that occurs, when conditioning on fixation of an allele.

Usage

fixationBias(traj, t, Ne, N.sim = 10000)

Arguments

traj	numeric matrix of allele frequency trajectories, where rows and columns correspond to individual replicates and time points, respectively.
t	numeric vector indicating the number of generations for each column in traj.
Ne	numeric specifying the effective population size
N.sim	numeric determining the number of simulations that should be performed to correct for bias (by default sim = 10000).

Value

Numeric vector with expected bias at each time point.

Author(s)

Thomas Taus

ThomasTaus/poolSeq documentation built on Feb. 17, 2020, 1:52 p.m.