Man pages for TobinH/microTransit
Quantitative Polarized Light Imaging and Analysis Tools
| acgEllipse | Graphical Representations of Angular Central Gaussian... |
| angGaussSumm | Estimate and Summarize Angular Central Gaussian Distribution... |
| buildqPLM | Build qPLMarr Object From Rotating Analyzer Images. |
| centroidCorr | Set Tangential Frame of Reference for Cortical Bone Axial... |
| densBiref | Estimate Birefringence of Bone Tissue From Mineral Density |
| jonesPol | Jones Matrix Representation of a Linear Polarizer Element |
| jonesRet | Jones Matrix Representation of a Retarder Element |
| KaminskyqPLM | Interactively Build qPLMarr Object From Werner Kaminsky's... |
| KaminskyqPLMScript | Build qPLM Array Object From Specified Rotopol(tm) Format... |
| makeBlock | Model an Embedded Tissue Block With Registration Marks |
| microTransit | microTransit: R tools for Quantitative Polarized Light... |
| pullCluster | Interactive Selection of Clustered Pixels |
| pullqPLMSample | Interactive Sub-sampling of qPLM Data by Pixel count |
| pullROI | Interactive Sub-sampling of qPLM Data by Region of Interest |
| qPLMClust | Spatial Clustering of Axial Orientation Data from qPLM |
| qPLMKeymaker | Create an Orientation Key for Interpreting qPLM Overview... |
| qPLMSphereSkinner | Create an 3D Skin for Interpreting qPLM Overview Images |
| qPLMTabulate | Place qPLMarr Data in Tabular Format |
| qPLMTiff | Produce Overview TIFFs From qPLM Arrays |
| registerSlide | Register the Position of a Slide in a Notched Block |
| Rotosim | Single-Pixel Simulation of Rotating Polarizer qPLM |
