pullROI: Interactive Sub-sampling of qPLM Data by Region of Interest

In TobinH/microTransit: Quantitative Polarized Light Imaging and Analysis Tools

Interactive Sub-sampling of qPLM Data by Region of Interest

Description

pullROI sub-samples a qPLMarr object with an interactively selected rectangular ROI.

Usage

pullROI(qPLMarr, layer)

Arguments

qPLMarr	A qPLMarr object.
layer	Value from 1-3; this layer will be displayed on-screen for selecting the ROI (1 = I, 2 = theta, 3 = phi). The resulting ROI will include all of the 'stacked' layers from the qPLMarr object.

Value

A qPLMarr object with the subsampled pixels. This object will maintain all the attributes of the original.

See Also

Other qPLM Analysis Functions: angGaussSumm(), centroidCorr(), pullCluster(), pullqPLMSample(), qPLMClust(), qPLMTabulate()

Examples

#oldwd<-getwd()
#setwd(system.file("extdata", package = "microTransit"))
#load("testqPLMarr.R")
#setwd(oldwd)

testROI<-pullROI(testqPLMarr, 2)

TobinH/microTransit documentation built on Jan. 19, 2024, 5:21 a.m.