Description Usage Arguments Examples
Prepare data (e.g., gene expression data) for synthetic lethal prediction (typically count or continous data) by bining samples into categorical data for each gene to be tested.
1 | prep_data_for_SL(dataset, n = 3L, exclude = T)
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dataset |
Dataset input to be formatted. Input is genes (rows) x samples (columns). Output data is transposed: samples (rows) x genes (columns). |
n |
number of quantiles to test. Must be an integer. Defaults to 3. |
exclude |
Do you wish to exclude genes without quartile variation? Defaults to TRUE. |
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