TomMayo/M3Ddevel: (development for M3D) Identifies differentially methylated regions across testing groups
(This package serves as development for the M3D Bioconductor package) This package identifies statistically significantly differentially methylated regions of CpGs. It uses kernel methods (the Maximum Mean Discrepancy) to measure differences in methylation profiles, and relates these to inter-replicate changes, whilst accounting for variation in coverage profiles.
Getting started
Browse package contents
Package details |
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| Author | Tom Mayo |
| Bioconductor views | Coverage CpGIsland DNAMethylation DifferentialMethylation |
| Maintainer | Tom Mayo <t.mayo@ed.ac.uk> |
| License | Artistic License 2.0 |
| Version | 1.5.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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