determineGroupComps: Creates strings of sample pair comparisons
In TomMayo/M3Ddevel: (development for M3D) Identifies differentially methylated regions across testing groups
Description
Usage
Arguments
Value
Author(s)
Description
Takes in a vector of strings of sample names and returns strings of
all the comparisons, either within a testing group or between testing groups.
This is not intended to be called directly by the user.
Usage
1
determineGroupComps(samples1, samples2 = NULL, type)
Arguments
samples1
A vector of sample names from one group
samples2
A vector of sample names from the other group, if we want to
specify between-group comparisons
type
'within' or 'between'. 'within' returns all the sample pairs
within samples1, 'between' returns all the sample pairs
between samples1 and samples2
Value
A vector of sample pair comparisons of the form 'sample1 vs sample2'
for use with the M3D functions
Author(s)
Tom Mayo t.mayo@ed.ac.uk
TomMayo/M3Ddevel documentation built on May 9, 2019, 4:53 p.m.
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Description Usage Arguments Value Author(s)
Description
Takes in a vector of strings of sample names and returns strings of all the comparisons, either within a testing group or between testing groups. This is not intended to be called directly by the user.
Usage
1 | determineGroupComps(samples1, samples2 = NULL, type)
|
Arguments
samples1 |
A vector of sample names from one group |
samples2 |
A vector of sample names from the other group, if we want to specify between-group comparisons |
type |
'within' or 'between'. 'within' returns all the sample pairs within samples1, 'between' returns all the sample pairs between samples1 and samples2 |
Value
A vector of sample pair comparisons of the form 'sample1 vs sample2' for use with the M3D functions
Author(s)
Tom Mayo t.mayo@ed.ac.uk
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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