Returns the columns of the test-statistic matrix that refer to specific samples. This is not intended to be called directly by the user.
A matrix containing the M3D test-statistic, the difference the full and methylation blind metrics, for each region in the CpGs object. Each column is a comparison between two samples, which are described in the column names.
A vector of sample pairs of the form 'sample1 vs sample2' as returned from determineGroupComps
Returns the indices of the M3D test-statistic components that contain the sample pair comparisons in 'samples'
Tom Mayo [email protected]
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