conv_ids_mart: Converting gene IDS using maRt

In Troshchk/bioEAT: bioExploreAnnotateTranslate

Description

This function returns a dataframe with the translated IDs. #'@details This function takes a vector of IDs and translated them from the input format to the output format using the selected maRt.

Usage

conv_ids_mart(input, mart, from, to)

Arguments

input	vector of IDs
mart	annotation maRt
from	input ID type
to	output ID type or vector of output ID types

Value

dataframe with translated IDs

Examples

conv_ids_mart(c("CDY2A","IGHM", "IGKC"), "mmulatta_gene_ensembl", "external_gene_name", 
c("entrezgene_id", "ensembl_gene_id"))

Troshchk/bioEAT documentation built on Dec. 18, 2021, 5:13 p.m.