API for UPSCb/RnaSeqTutorial
RNA-Seq Tutorial
| Global functions | |
|---|---|
| Density plot | Man page |
| Deprecated data | Man page |
| Functional Genomics High Level | Man page |
| GC calculation | Man page |
| Heatscatter based plot | Man page |
| MA plot | Man page |
| Multiple density plot | Man page |
| Package data accessor | Man page |
| RnaSeqTutorial | Man page |
| RnaSeqTutorial package | Man page |
| RnaSeqTutorial package-package | Man page |
| RnaSeqTutorial-package | Man page |
| Volcano plot | Man page |
| createDESeqDataSet | Man page |
| createDESeqDataSet,matrix,data.frame-method | Man page |
| densityPlot | Man page |
| densityPlot,numeric,numeric-method | Man page |
| extdata | Man page |
| extdata,missing-method | Man page |
| gAnnot | Man page |
| gcFunction | Man page |
| gcFunction,DNAStringSet-method | Man page |
| nonExpressed | Man page |
| nonExpressed,matrix-method | Man page |
| plot.multidensity | Man page |
| plot.multidensity,list-method | Man page |
| plotMA | Man page |
| plotMA,DataFrame-method | Man page |
| plotMALSD | Man page |
| plotMALSD,data.frame-method | Man page |
| plotPca, | Man page |
| plotPca,matrix,data.frame-method | Man page |
| plotUnTransformed | Man page |
| plotUnTransformed,DESeqDataSet-method | Man page |
| rawDataMeanPlot | Man page |
| rawDataMeanPlot,matrix-method | Man page |
| rawDataSamplePlot | Man page |
| rawDataSamplePlot,matrix-method | Man page |
| readAbundance | Man page |
| readAbundance,character-method | Man page |
| reportSizeFactors | Man page |
| reportSizeFactors,DESeqDataSet-method | Man page |
| syntheticTrx | Man page |
| transform | Man page |
| transform,DESeqDataSet-method | Man page |
| vignette | Man page |
| volcanoPlot | Man page |
| volcanoPlot,DataFrame-method | Man page |
