RnaSeqTutorial-gcFunction: GC calculation
In UPSCb/RnaSeqTutorial: RNA-Seq Tutorial
Description
Usage
Arguments
Details
Value
Examples
Description
Simple function to calculate the GC percentage of sequences
Usage
1
gcFunction(x)
Arguments
x
a DNAStringSet
Details
This function simply lookup the amount of G and C bp in DNAStringSet and
return the sequences GC proportion. The function was originally written
by Martin Morgan for the original version of that package.
Value
The percent GC of the sequences in x
Examples
1
2
3
4
## Not run:
gcFunction(someDNAStringSet)
## End(Not run)
UPSCb/RnaSeqTutorial documentation built on Nov. 24, 2020, 12:40 a.m.
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Description Usage Arguments Details Value Examples
Description
Simple function to calculate the GC percentage of sequences
Usage
1 | gcFunction(x)
|
Arguments
x |
a DNAStringSet |
Details
This function simply lookup the amount of G and C bp in DNAStringSet and return the sequences GC proportion. The function was originally written by Martin Morgan for the original version of that package.
Value
The percent GC of the sequences in x
Examples
1 2 3 4 | ## Not run:
gcFunction(someDNAStringSet)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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