RnaSeqTutorial-plotmultidensity: Multiple Density plot

Description Usage Arguments Details See Also Examples

Description

Draws multiple density curves within a single plot.

Usage

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plot.multidensity(x, xlab = "x", col = brewer.pal(8, "Dark2"),
  legend.x = "top", xlim = NULL, ylim = NULL, lty = 1,
  legend.cex = 1, legend = NULL, ...)

Arguments

x

a list of numeric vectors

xlab

the label of the x axis, default to x

col

the color palette to use default to brewer.pal(8,"Dark2") from the RColorBrewer package.

legend.x

the position of the legend, default to "top", see the legend function for more details about the positional argument

xlim

the xlim defaults to NULL. If NULL the limit is automatically calculated

ylim

the ylim defaults to NULL. If NULL the limit is automatically calculated

lty

the line type, default to 1 (blank), see par for more details

legend.cex

the character expansion of the legend, defaults to 1, see cex for more details

legend

the legend to be displayed, if NULL and x is a named list, the names are used as legend, otherwise the legend is omitted. If provided, it must be a list of length length(x)

...

additional argument passed to the plot and lines functions.

Details

This function calculates the most suitable axis from the densities calculated from the provided list of numerical vectors and display all densities in a single plot

See Also

RColorBrewer, legend and par

Examples

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## Not run: 
## TODO add an object after putting results in the data folder
## and use that for plotting the example
data(RST-densities)
plot.multidensity(density.list)

## End(Not run)

UPSCb/RnaSeqTutorial documentation built on Nov. 24, 2020, 12:40 a.m.