EstimatedParameters-class: An S4 class representing the estimated parameters
In USCbiostats/HiLDA: Conducting statistical inference on comparing the mutational exposures of mutational signatures by using hierarchical latent Dirichlet allocation
Description
An S4 class representing the estimated parameters
Slots
sampleLista list of sample names observed in the input mutation data
signatureNumthe number of mutation signatures specified at the time
of estimation
isBackGroundthe flag showing whether the background signature data is
used or not.
backGroundProbthe background signatures
signatureFeatureDistributionestimated parameters for mutation
signatures
sampleSignatureDistributionestimated parameters for memberships of
mutation signatures for each sample
loglikelihoodthe log-likelihood value for the estimated parameters
USCbiostats/HiLDA documentation built on Oct. 15, 2021, 10:22 a.m.
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Description
An S4 class representing the estimated parameters
Slots
sampleLista list of sample names observed in the input mutation data
signatureNumthe number of mutation signatures specified at the time of estimation
isBackGroundthe flag showing whether the background signature data is used or not.
backGroundProbthe background signatures
signatureFeatureDistributionestimated parameters for mutation signatures
sampleSignatureDistributionestimated parameters for memberships of mutation signatures for each sample
loglikelihoodthe log-likelihood value for the estimated parameters
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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