tcplDefine: Load data dictionary descriptions

In USEPA/CompTox-ToxCast-tcpl: ToxCast Data Analysis Pipeline

Load data dictionary descriptions

Description

tcplDefine queries the tcpl databases and returns field descriptions from the data dictionary.

Usage

tcplDefine(val = NULL)

Arguments

val	The values to query on. Can be any combination of table names (to return all of its field descriptions) and field names

Details

Short descriptions of fields for different tables are stored in a data dictionary. Query by table name to retrieve descriptions of each field in the given table, and/or query by field name to retrieve descriptions on every field with the given name, regardless of which table they belong to.

Value

A data.table with the data dictionary information for the given parameters.

Examples

## Store the current config settings, so they can be reloaded at the end 
## of the examples
conf_store <- tcplConfList()
tcplConf(drvr = "example")

## Passing no parameters returns all of the fields described in the data
## dictionary
tcplDefine()

## Specifying table names of 'chemical' and 'sample' yields all of the
## fields from the 'chemical' and 'sample' tables
tcplDefine(c("chemical", "sample"))

## Specifying a field of 'wllt' yields all of the fields from any table that
## contains 'wllt' as a field
tcplDefine("wllt")

## Specifying a combination of table and field names results in all of the
## fields which are contained in the given tables and all of the given fields
## found in any table
tcplDefine(c("chemical", "spid", "wllt"))

## Reset configuration
options(conf_store)

USEPA/CompTox-ToxCast-tcpl documentation built on April 22, 2024, 12:37 p.m.