get_lrg_mort: Get mortality of large reef building genera

Description Usage Arguments Value Examples

Description

Get mortality of large reef building genera

Usage

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get_lrg_mort(dat_in, gen = c("Acropora", "Colpophyllia", "Dendrogyra",
  "Orbicella", "Pseudodiploria"))

Arguments

dat_in

coral demographic data with esimated csa (from est_3d)

gen

chr string of large genera

Value

data frame with counts of large genera (abundance as number of individuals/colonies) and one estimate of mortality per station estimated as average of individual mortality from 0 - 1

Examples

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crl_dem$csa <- with(crl_dem, est_3d(species_name, Height, MaxDiam, PerpDiam))
get_lrg_mort(crl_dem)

USEPA/CoralBCG documentation built on May 20, 2019, 3:28 p.m.