API for USEPA/LUMA
LCMS-Based Untargeted Metabolomics Assistant
| Global functions | |
|---|---|
| .CAMERASanityCheck | Source code |
| .LUMA_order | Man page Source code |
| .PreProcess_Files | Source code |
| .SameElements | Source code |
| .convert_EIC | Man page Source code |
| .gen_IHL | Source code |
| .gen_res | Man page Source code |
| .get_DataFiles | Source code |
| .get_Peaklist | Source code |
| .get_rules | Source code |
| .isWhole | Man page Source code |
| .mypaste | Source code |
| .obj_check | Source code |
| .set_PreProcessFileNames | Source code |
| .trim_table_by_eic | Source code |
| .trim_table_by_metgroup | Source code |
| .trim_table_by_mz | Source code |
| .validate_metgroup | Man page Source code |
| .xcmsSanityCheck | Source code |
| AnnotatePeaklist | Man page Source code |
| CAMERAFiles_dlg | Man page Source code |
| CombineFeatures | Man page Source code |
| CombinePeaklists | Man page Source code |
| CullBackground | Man page Source code |
| CullCV | Man page Source code |
| CullMF | Man page Source code |
| CullVoidVolume | Man page Source code |
| FinalWorkflow | Man page Source code |
| FormatForMetaboAnalystR | Man page Source code |
| FormatForSIMCA | Man page Source code |
| InitWorkflow | Man page Source code |
| InputFiles_dlg | Man page Source code |
| NormalizePeaklists | Man page Source code |
| ParseCAMERA | Man page Source code |
| Peaklist_Pos | Man page |
| ScriptInfo_dlg | Man page Source code |
| SimplyPeaklists | Man page Source code |
| calc_corrstat | Man page Source code |
| calc_cv | Man page Source code |
| calc_minfrac | Man page Source code |
| combine_ion_modes | Man page Source code |
| combine_phenodata | Man page Source code |
| connect_libdb | Man page Source code |
| connect_lumadb | Man page Source code |
| connect_peakdb | Man page Source code |
| find_Background | Man page Source code |
| find_Background.monoMass | Man page Source code |
| find_Background.mz | Man page Source code |
| format_MetabolomicData | Man page Source code |
| format_MetabolomicData.default | Man page Source code |
| format_MetabolomicData.mass_all | Man page Source code |
| format_MetabolomicData.pktable | Man page Source code |
| format_simca | Man page Source code |
| gen_filebase | Man page Source code |
| get_features | Man page Source code |
| mSetObj | Man page |
| match_Annotation | Man page Source code |
| normalize_unit | Man page Source code |
| output_MetaData | Man page Source code |
| output_MetaData.default | Man page Source code |
| output_MetaData.mass_all | Man page Source code |
| output_MetaData.pktable | Man page Source code |
| parse_neg_results | Man page Source code |
| parse_pos_results | Man page Source code |
| plot_ionduplicate | Man page Source code |
| plot_metgroup | Man page Source code |
| pre_combine_ion_modes | Man page Source code |
| read_tbl | Man page Source code |
| remove_background_peaks | Man page Source code |
| remove_ion_dup | Man page Source code |
| remove_void_volume | Man page Source code |
| replace_zeros_normalize | Man page Source code |
| search_IonDup | Man page Source code |
| search_IonDup.monoMass | Man page Source code |
| search_IonDup.mz | Man page Source code |
| sum_features | Man page Source code |
| trim_cv | Man page Source code |
| trim_minfrac | Man page Source code |
| trim_minfrac.monoMass | Man page Source code |
| trim_minfrac.mz | Man page Source code |
| trim_rt | Man page Source code |
| trim_rt.monoMass | Man page Source code |
| trim_rt.mz | Man page Source code |
| wrap_camera | Man page Source code |
| wrap_xcms | Man page Source code |
| write_tbl | Man page Source code |
| write_xlsx | Man page Source code |
