Megastudy-class: Megastudy
In VEuPathDB/veupathUtils: General Helper Functions for VEuPathDB Projects
Megastudy-class R Documentation
Megastudy
Description
A class to encapsulate everything we need for our special handling
of 'megastudies' in EDA. Currently that is imputing zeroes on tall data
given that each (sub-)study has different expected vocabularies for
that data.
Slots
dataA data.table
ancestorIdColumnsA character vector of column names representing parent entities of the recordIdColumn.
studySpecificVocabulariesveupathUtils::StudySpecificVocabulariesByVariableList
collectionIdsA data.table including collection ids and any variables of interest for the collection entity.
If none provided, the collection ids will be inferred from those present in data.
VEuPathDB/veupathUtils documentation built on Feb. 8, 2025, 12:29 p.m.
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| Megastudy-class | R Documentation |
Megastudy
Description
A class to encapsulate everything we need for our special handling of 'megastudies' in EDA. Currently that is imputing zeroes on tall data given that each (sub-)study has different expected vocabularies for that data.
Slots
dataA data.table
ancestorIdColumnsA character vector of column names representing parent entities of the recordIdColumn.
studySpecificVocabulariesveupathUtils::StudySpecificVocabulariesByVariableList
collectionIdsA data.table including collection ids and any variables of interest for the collection entity. If none provided, the collection ids will be inferred from those present in
data.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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