manhattanPlot: manhattan plot function

In WMBEdmands/MetMSLine: an automated and fully integrated pipeline for rapid processing of high-resolution LC-MS metabolomic datasets.

Description

manhattan plot function

Usage

manhattanPlot(x = NULL, y = NULL, data = NULL, cols = NULL,
  plotOutputFile = NULL, minPval = 0.05, labelFontSize = 15, ...)

Arguments

x	character string of a single column name representing the x axis (e.g. order or mass-to charge ratio).
y	character string of a single column name (if data argument supplied) containing the statistical test p-values the y axis.
data	data.frame containing the x and y columns
cols	numeric vector of integers, hexadecimal colours or names of colours for data points.
plotOutputFile	character string full path to write output image file (see

WMBEdmands/MetMSLine documentation built on May 9, 2019, 10:03 p.m.