| format_error | Format error |
| get_annotations | Format simulation annotations |
| get_init_condits | Initial conditions |
| get_M_indices | m-value information |
| get_M_vals | Select M ranges |
| get_rateConst | Get rate constants |
| get_Xreg | X matrix for regression |
| getXY | X and Y data |
| get_Yreg | Y vector for regression |
| Hcompute | The continuous Hartley transform |
| HMF1compute | HMF spectral component of the 1st derivative |
| HMFcompute | HMF spectral component |
| HMF_fit | System identification |
| multiorgan | Multi-organ gene expression data |
| odemodel | Dynamic model |
| scale_zeroOne | Normalization 0,1 |
| select_best | Best simulation |
| sim_best | Implement simulation |
| sim_error | Simulate the dynamic model and record the agreement with the... |
| sim_plots | Plot simulation data |
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