BoxView: Boxplot

In WubingZhang/ggView: Practical package for scientific plotting

Boxplot

Description

Boxplot

Usage

BoxView(
  gg,
  x,
  y,
  color = "black",
  fill = NA,
  width = 0.5,
  size = 1,
  comparisons = NULL,
  test.method = "wilcox.test",
  p.label = c("p.signif", "p.format")[1],
  add.jitter = FALSE,
  jitter.color = color,
  jitter.size = size,
  jitter.shape = 16,
  jitter.width = 0.2,
  jitter.height = 0,
  label = NULL,
  toplabels = c(),
  label.size = 5,
  label.force = 3,
  alpha = 1,
  main = NULL,
  xlab = x,
  ylab = y,
  legend.position = "none",
  ...
)

Arguments

gg	A data frame.
x	Character, specifying the column name for x plotting.
y	Character, specifying the column name for y plotting.
color	Character, specifying the column name/color.
fill	Character, specifying the column name/fill color.
width	Numeric, specifying the box width.
size	Numeric, specifying size of the box.
comparisons	A list, customizing the comparisons.
test.method	Character, specifying the statistical test method.
p.label	Character, "p.signif" (shows the significance levels), or "p.format" (shows the formatted p value).
add.jitter	Boolean, whether add jitter into the plot.
jitter.color	Character, specifying the column name/color of the points.
jitter.size	Numeric, specifying size of the jitter.
jitter.shape	Numeric, specifying the shape of the dots.
jitter.width	Numeric, specifying the width of the jitter region.
label	Character, specifying the column name for dot label.
toplabels	Character, specifying the column name/color of the points.
label.size	Numeric, specifying size of the labels.
label.force	Numeric, force of repulsion between overlapping text labels. Defaults to 3.
alpha	A numeric, specifying the transparency of the boxes.
main	Title of the figure.
xlab	Title of x-axis
ylab	Title of y-axis.
legend.position	Position of legend, "none", "right", "top", "bottom", or a two-length vector indicating the position.
...	Other parameters in geom_boxplot.

Value

An object created by ggplot, which can be assigned and further customized.

Author(s)

Wubing Zhang

WubingZhang/ggView documentation built on March 11, 2024, 3:33 a.m.