ViolinView | R Documentation |
Plots the violin of beta scores in Control and Treatment samples.
ViolinView(
beta,
samples = NULL,
main = NULL,
ylab = "Beta Score",
filename = NULL,
width = 5,
height = 4,
...
)
beta |
Data frame, , including |
samples |
Character, specifying the name of samples to be compared. |
main |
As in 'plot'. |
ylab |
As in 'plot'. |
filename |
Figure file name to create on disk. Default filename="NULL", which means don't save the figure on disk. |
width |
As in ggsave. |
height |
As in ggsave. |
... |
Other available parameters in function 'ggsave'. |
An object created by ggplot
, which can be assigned and further customized.
Wubing Zhang
DensityView
data(mle.gene_summary)
# Read beta score from gene summary table in MAGeCK MLE results
dd = ReadBeta(mle.gene_summary)
ViolinView(dd, samples=c("dmso", "plx"))
#or
ViolinView(dd[, c("dmso", "plx")])
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