Files in WubingZhang/rMAUPS
Model-Based Analysis of Ubiquitin-Proteome System Based Protein Degradation.
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/DEAnalyze.R
R/DEqMS.R
R/DataCorrelation.R
R/MAUPSr.R
R/ProteomicsQC.R
R/TransGeneID.R
R/TransformCount.R
R/arrangePngs.R
R/corComplex.R
R/countNA.R
R/deComplex.R
R/ggView.R
R/gsGetter.R
R/gsScore.R
R/imputation.R
R/normalizeProteomics.R
R/protSequence.R
R/view.R
README.md
inst/doc/rMAUPS.R
inst/doc/rMAUPS.Rmd
inst/doc/rMAUPS.html
inst/doc/ubiquitin.R
inst/doc/ubiquitin.Rmd
inst/doc/ubiquitin.html
inst/extdata/GeneID_Annotation_hsa.rds
inst/extdata/HOM_GeneID_Annotation_mmu_hsa.rds
inst/extdata/corum.all.entrez.hsa.rds
inst/extdata/experiment1_export_proteins.txt
inst/extdata/experiment2_export_proteins.txt
inst/extdata/human_uniprot_seq.txt
inst/extdata/kegg.all.entrez.hsa.rds
inst/extdata/metadata.csv
inst/extdata/reactome.all.entrez.hsa.rds
man/BarView.Rd
man/Count2TPM.Rd
man/CutoffCalling.Rd
man/DEAnalyze.Rd
man/DataCorrelation.Rd
man/DeComplex.Rd
man/DensityView.Rd
man/IdentBarView.Rd
man/MAUPSr.Rd
man/ProteomicsQC.Rd
man/ReadGMT.Rd
man/Residualplot.Rd
man/ScatterView.Rd
man/SpectraCounteBayes.Rd
man/TransGeneID.Rd
man/TransformCount.Rd
man/VarianceBoxplot.Rd
man/VarianceScatterplot.Rd
man/ViolinView.Rd
man/arrangePngs.Rd
man/browseProtStructure.Rd
man/corComplex.Rd
man/countNA.Rd
man/filterN.Rd
man/getGeneAnn.Rd
man/getOrg.Rd
man/getOrtAnn.Rd
man/gsGetter.Rd
man/gsScore.Rd
man/imputeNA.Rd
man/lowAbundanceResampling.Rd
man/normalizeProteomeDiscoverer.Rd
man/normalizeProteomics.Rd
man/pcView.Rd
man/readPSPUbiquitin.Rd
man/replicateBasedResampling.Rd
man/retrieve_gs.Rd
man/searchProtSeq.Rd
man/view.Rd
rMAUPS.Rproj
vignettes/rMAUPS.Rmd
vignettes/ubiquitin.Rmd
