MMCatalog2ICAMS: Convert Catalogs (File or Matrix) from MM format to ICAMS...
In WuyangFF95/SynSigEval: Evaluate Results of Mutational Signature Analysis Software on Synthetic Spectra Created by Package SynSigGen
View source: R/MultiModalMuSigInteraction.R
MMCatalog2ICAMS R Documentation
Convert Catalogs (File or Matrix) from MM format to ICAMS format
Description
Convert Catalogs (File or Matrix) from MM format to ICAMS format
Usage
MMCatalog2ICAMS(cat, region = "unknown", catalog.type = "counts.signature")
Arguments
cat
Input catalog, can be a tab-delimited file
or matrix in MultiModalMuSig format.
region
Catalog region. Can be a specific genomic
or exomic region, or "unknown".
Default: "unknown"
catalog.type
Is the catalog a signature catalog,
or a spectrum catalog?
Default: "counts.signature"
Value
a catalog matrix in ICAMS format.
WuyangFF95/SynSigEval documentation built on Sept. 18, 2022, 11:41 a.m.
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View source: R/MultiModalMuSigInteraction.R
| MMCatalog2ICAMS | R Documentation |
Convert Catalogs (File or Matrix) from MM format to ICAMS format
Description
Convert Catalogs (File or Matrix) from MM format to ICAMS format
Usage
MMCatalog2ICAMS(cat, region = "unknown", catalog.type = "counts.signature")
Arguments
cat |
Input catalog, can be a tab-delimited file or matrix in MultiModalMuSig format. |
region |
Catalog region. Can be a specific genomic or exomic region, or "unknown". Default: "unknown" |
catalog.type |
Is the catalog a signature catalog, or a spectrum catalog? Default: "counts.signature" |
Value
a catalog matrix in ICAMS format.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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