Files in YosefLab/MPRAnalyze
Statistical Analysis of MPRA data
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/MpraObject.R
R/accessFunctions.R
R/analysisFunctions.R
R/data.R
R/hypothesisTesting.R
R/libraryDepth.R
R/likelihoodFunctions.R
R/modelSelection.R
R/objectiveFunctions.R
R/optimizers.R
R/simulateMPRA.R
R/utilFunctions.R
README.md
data/ChrEpi.rda
inst/CITATION
man/ChrEpi.Rd
man/MpraObject.Rd
man/analyzeComparative.Rd
man/analyzeQuantification.Rd
man/estimateDepthFactors.Rd
man/extractModelParameters.Rd
man/getAlpha.Rd
man/getDistrParam.Rd
man/getFits_DNA.Rd
man/getFits_RNA.Rd
man/setDepthFactors.Rd
man/setModel.Rd
man/simulateMPRA.Rd
man/testCoefficient.Rd
man/testEmpirical.Rd
man/testLrt.Rd
vignettes/vignette.Rmd
