TMM_FN: Weighted trimmed mean of M-values (TMM) scaling normalization...
In YosefLab/scone: Single Cell Overview of Normalized Expression data
View source: R/SCONE_DEFAULTS.R
TMM_FN R Documentation
Weighted trimmed mean of M-values (TMM) scaling normalization wrapper
function
Description
Weighted trimmed mean of M-values (TMM) scaling normalization wrapper
function
Usage
TMM_FN(ei)
Arguments
ei
Numerical matrix. (rows = genes, cols = samples).
Details
SCONE scaling wrapper for calcNormFactors).
Value
TMM normalized matrix.
Examples
ei <- matrix(0:20,nrow = 7)
eo <- TMM_FN(ei)
YosefLab/scone documentation built on Oct. 21, 2024, 4:39 p.m.
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View source: R/SCONE_DEFAULTS.R
| TMM_FN | R Documentation |
Weighted trimmed mean of M-values (TMM) scaling normalization wrapper function
Description
Weighted trimmed mean of M-values (TMM) scaling normalization wrapper function
Usage
TMM_FN(ei)
Arguments
ei |
Numerical matrix. (rows = genes, cols = samples). |
Details
SCONE scaling wrapper for calcNormFactors).
Value
TMM normalized matrix.
Examples
ei <- matrix(0:20,nrow = 7)
eo <- TMM_FN(ei)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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