get_qc: Get Quality Control Matrix
In YosefLab/scone: Single Cell Overview of Normalized Expression data
get_qc R Documentation
Get Quality Control Matrix
Description
Get Quality Control Matrix
Usage
get_qc(x)
## S4 method for signature 'SconeExperiment'
get_qc(x)
Arguments
x
an object of class SconeExperiment.
Value
NULL or the quality control (QC) metric matrix.
Examples
set.seed(42)
mat <- matrix(rpois(500, lambda = 5), ncol=10)
colnames(mat) <- paste("X", 1:ncol(mat), sep="")
obj <- SconeExperiment(mat,
qc = cbind(colSums(mat),colSums(mat > 0)))
qc = get_qc(obj)
YosefLab/scone documentation built on March 12, 2024, 10:48 p.m.
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| get_qc | R Documentation |
Get Quality Control Matrix
Description
Get Quality Control Matrix
Usage
get_qc(x)
## S4 method for signature 'SconeExperiment'
get_qc(x)
Arguments
x |
an object of class |
Value
NULL or the quality control (QC) metric matrix.
Examples
set.seed(42)
mat <- matrix(rpois(500, lambda = 5), ncol=10)
colnames(mat) <- paste("X", 1:ncol(mat), sep="")
obj <- SconeExperiment(mat,
qc = cbind(colSums(mat),colSums(mat > 0)))
qc = get_qc(obj)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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