API for YuLab-SMU/BMplot
BMplot for Base Modification Visulization
| Global functions | |
|---|---|
| .check_and_make_sampleNames | Source code |
| .check_valueNames | Source code |
| .check_variables_names | Source code |
| .onAttach | Source code |
| A_thaliana_BSobj | Man page |
| A_thaliana_dmR | Man page |
| BMplot | Man page |
| BMplot-package | Man page |
| BSseq | Man page |
| BSseq-methods | Man page |
| Human_BSobj | Man page |
| Human_dmR | Man page |
| SamepleBedFiles | Man page Source code |
| SamepleTxtFiles | Man page Source code |
| SampleFileFolder | Man page Source code |
| as.aaplot | Source code |
| assay | Man page |
| assays | Man page |
| bmData | Man page Source code |
| bmData-class | Man page |
| bmData-methods | Man page |
| create_regex_patterns_negative | Man page Source code |
| create_regex_patterns_positive | Man page Source code |
| detect_strand_and_motif | Source code |
| getBaseModificationDf | Man page |
| getBaseModificationDf, | Man page |
| getBaseModificationDf,ANY,BSseq-method | Man page |
| getBaseModificationDf,ANY,bmData-method | Man page |
| getBaseModificationDf.BSseq | Man page Source code |
| getBaseModificationDf.BSseq.internal | Source code |
| getBaseModificationDf.bmData | Man page Source code |
| getBaseModificationDf.bmData.internal | Source code |
| grid.draw.aaplot | Source code |
| loadBSgenome | Source code |
| makeBSseqData | Man page |
| make_Methylation_reference | Source code |
| make_bmData_from_value1 | Source code |
| make_bmData_from_value1_and_value2 | Source code |
| make_reference | Source code |
| makebmDataFromData | Man page |
| makebmDataFromData,CompressedGRangesList-method | Man page |
| makebmDataFromData,GRanges-method | Man page |
| makebmDataFromData,data.frame-method | Man page |
| makebmDataFromData,list-method | Man page |
| makebmDataFromData.internal | Man page Source code |
| makebmDataFromFiles | Man page Source code |
| makebmDataFromFiles.file | Source code |
| makebmDataFromFiles.folder | Source code |
| plotBaseModificationProf | Man page Source code |
| plotBaseModificationProf.internal | Source code |
| print.aaplot | Source code |
| reexports | Man page |
| simulated_BSobj | Man page |
| simulated_IPD | Man page |
| simulated_dmR | Man page |
