A_thaliana_dmR: Different methylation region created by DSS
In YuLab-SMU/BMplot: BMplot for Base Modification Visulization
A_thaliana_dmR R Documentation
Different methylation region created by DSS
Description
A data set contains information of different methylation region
see data-row/A_thaliana_data_procession.R
Usage
A_thaliana_dmR
Format
A data frame with 1 row and 9 variables
- chr
chromosome, the chromosome information of dmR
- start
the start site of dmR
- end
the end site of dmR
- length
the length of dmR
- nCG
Number of CpG sites contained in the DMR
- meanMethy1
Average methylation levels in two conditions
- meanMethy2
Average methylation levels in two conditions
- diff.Methy
The difference in the methylation levels between two conditions
- areaStat
The sum of the test statistics of all CpG sites within the DMR
YuLab-SMU/BMplot documentation built on June 1, 2025, 4:09 p.m.
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| A_thaliana_dmR | R Documentation |
Different methylation region created by DSS
Description
A data set contains information of different methylation region see data-row/A_thaliana_data_procession.R
Usage
A_thaliana_dmR
Format
A data frame with 1 row and 9 variables
- chr
chromosome, the chromosome information of dmR
- start
the start site of dmR
- end
the end site of dmR
- length
the length of dmR
- nCG
Number of CpG sites contained in the DMR
- meanMethy1
Average methylation levels in two conditions
- meanMethy2
Average methylation levels in two conditions
- diff.Methy
The difference in the methylation levels between two conditions
- areaStat
The sum of the test statistics of all CpG sites within the DMR
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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