Man pages for YuLab-SMU/GOSemSim
GO-terms Semantic Similarity Measures
| buildGOmap | buildGOmap |
| clusterSim | Semantic Similarity Between Two Gene Clusters |
| combineScores | combining similarity matrix to similarity score |
| geneSim | Semantic Similarity Between two Genes |
| godata | godata |
| GOSemSimDATA-class | Class "GOSemSimDATA" This class stores IC and gene to go... |
| GOSemSim-package | GOSemSim: GO-terms Semantic Similarity Measures |
| goSim | Semantic Similarity Between Two GO Terms |
| go_term_table | Information content of GO terms |
| infoContentMethod | information content based methods |
| load_OrgDb | load_OrgDb |
| mclusterSim | Pairwise Semantic Similarities for a List of Gene Clusters |
| mgeneSim | Pairwise Semantic Similarity for a List of Genes |
| mgoSim | Semantic Similarity Between two GO terms lists |
| read.blast2go | read.blast2go |
| read-gaf | read.gaf |
| tcss_cutoff | determine the topological cutoff for TCSS method |
| termSim | termSim |
| wangMethod_internal | wangMethod |
