godata: godata

View source: R/godata.R

godataR Documentation

godata

Description

prepare GO DATA for measuring semantic similarity

Usage

godata(
  OrgDb = NULL,
  keytype = "ENTREZID",
  ont,
  computeIC = TRUE,
  processTCSS = FALSE,
  cutoff = NULL
)

Arguments

OrgDb

OrgDb object

keytype

keytype

ont

one of 'BP', 'MF', 'CC'

computeIC

logical, whether computer IC

processTCSS

logical, whether to process TCSS

cutoff

cutoff of TCSS

Value

GOSemSimDATA object

Author(s)

Guangchuang Yu


YuLab-SMU/GOSemSim documentation built on Nov. 2, 2022, 2:57 p.m.