plot.LSKAT.gen.plink: Plot Manhattan figure.
In ZWang-Lab/LSKAT: SNP-set (Sequence) Kernel Association Test for longitudinal data.
Description
Usage
Arguments
See Also
Examples
Description
This function draws manhattan figure using the p-value of LSKAT and L-Burden.
Usage
1
plot.LSKAT.gen.plink( r.lskat, pdf.file, title, y.max, bonferroni )
Arguments
r.lskat
The list object with S3 class name: LSKAT.gen.plink, obtained from longskat_gene_plink.
pdf.file
String, the file name of PDF output.
title
String, title
y.max
Numeric, the maximum value of Y-axis
bonferroni
Boolean, indicating whether Bonferroni correction is used in the plot
See Also
Examples
1
## check the code in the function longskat_gene_plink
ZWang-Lab/LSKAT documentation built on May 10, 2019, 1:55 a.m.
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Description Usage Arguments See Also Examples
Description
This function draws manhattan figure using the p-value of LSKAT and L-Burden.
Usage
1 | plot.LSKAT.gen.plink( r.lskat, pdf.file, title, y.max, bonferroni )
|
Arguments
r.lskat |
The list object with S3 class name: LSKAT.gen.plink, obtained from |
pdf.file |
String, the file name of PDF output. |
title |
String, title |
y.max |
Numeric, the maximum value of Y-axis |
bonferroni |
Boolean, indicating whether Bonferroni correction is used in the plot |
See Also
Examples
1 | ## check the code in the function longskat_gene_plink
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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