gffSetATGas0: gffSetATGas0

View source: R/setATGas0.R

gffSetATGas0R Documentation

gffSetATGas0

Description

set ATG posision as 0.

Usage

gffSetATGas0(gff = gff, hap = hap,
             geneID = geneID,
             Chr = Chr, POS = c(start, end))

Arguments

gff

imported gff

hap

hap result with meta infos

geneID

geneID

Chr

Chrom name

POS

vector defined by start and end position

Value

filtered gff with set ATG position as 0

Examples

data("quickHap_test")
hap <- get_hap(vcf)
gffn <- gffSetATGas0(gff = gff, hap = hap,
                  geneID = "test1G0387",
                  Chr = "scaffold_1",
                  POS = c(4300, 7910))

ZhangRenL/quickHapR documentation built on June 17, 2022, 12:04 a.m.