Man pages for ZhenWei10/m6ALogisticModel
Linear model analysis on RNA modification data.
| distance_map | calculate the distance to the nearest 5' or 3' subject... |
| find_longest_transcript | Find the longest transcript given an GRangesList object... |
| glm_bas | Conduct bayesian model selection, inference, and... |
| glm_multinomial | Build and visualize a logistic model to analyze the... |
| glm_regular | Build and visualize a generalized linear model. |
| go_multinomial | Run GO analysis over methylation sets with multi-class... |
| group_list_expanded | An alternative group list |
| Infer_loop | Infer looped RNA 2ndary structures given provided hybridized... |
| plot_row_joint | Plot the joint distribution between rows of a genomic assay. |
| predictors_annot | Generate predictors/features for a range based RNA... |
| predictors_annot_old | Generate predictors/features for a range based RNA... |
| Properties_map | Dealing with ambiguities of the GRanges in query that may... |
| Reduce_correlated_rows | Subset the rows/genomic features that are close on genomic... |
| Relative_Pos_map | Calculate the relative position of a GRanges object on... |
| Sample_sequence | Sample nucleotides or motifs on a subset of genome defined by... |
| sequence_features | Generate the sequence feature matrix from GRanges. |
| sequence_features_old | Generate the sequence feature matrix from GRanges. |
| Struc_hg19 | MEA RNA 2ndary structures of hg19 exons predicted by RNAfold |
| Struc_mm10 | MEA RNA 2ndary structures of mm10 exons predicted by RNAfold |
