rBS_df: An example table of RNA bisulfite sequencing data processed...
In ZhenWei10/rBS2ndStructure: Filter the thermal stable RNA secondary structure
Description
Usage
Format
Source
Description
The data comes from a subset of MeRanTK processed RNA bisulfite sample of human MCF10A cell.
The table is directly imported from the txt file generated by the MeRanCall of MeRanTK with minimum read coverage of 10 and maximum conversion rate of 1.
Usage
1
Format
A data.frame object with 100000 rows and 20 columns:
#SeqID : the chromosomal IDs provided by the reference trasncripts of hg19.
refStrand : the strands of the sites.
refPos: the location of the sites.
p-value_mState: the hypergeometric p value related to the statistical significance of the methylation state.
...
Source
http://icbi.at/software/meRanTK/
ZhenWei10/rBS2ndStructure documentation built on Dec. 26, 2019, 3:37 a.m.
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Description Usage Format Source
Description
The data comes from a subset of MeRanTK processed RNA bisulfite sample of human MCF10A cell. The table is directly imported from the txt file generated by the MeRanCall of MeRanTK with minimum read coverage of 10 and maximum conversion rate of 1.
Usage
1 |
Format
A data.frame object with 100000 rows and 20 columns:
#SeqID : the chromosomal IDs provided by the reference trasncripts of hg19. refStrand : the strands of the sites. refPos: the location of the sites. p-value_mState: the hypergeometric p value related to the statistical significance of the methylation state. ...
Source
http://icbi.at/software/meRanTK/
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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