tests/testthat/testClassify.R
In a-thind/PathAnalyser: ER & HER2 Pathway Activity Analysis For Breast Cancer Transcriptomic Datasets
test_that("classification method tests", {
data("ER_SET_sig")
data("ER_TCGA_RNAseq")
load("normalized_ER_TCGA_RNAseq.rda")
load("ER_classes_df.default_actual.rda")
ER_classes_df.default<- classify_gsva_percent(normalized_ER_TCGA_RNAseq, ER_SET_sig)
expect_equal(ER_classes_df.default_actual, ER_classes_df.default)
})
a-thind/PathAnalyser documentation built on May 6, 2022, 9:50 a.m.
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test_that("classification method tests", {
data("ER_SET_sig")
data("ER_TCGA_RNAseq")
load("normalized_ER_TCGA_RNAseq.rda")
load("ER_classes_df.default_actual.rda")
ER_classes_df.default<- classify_gsva_percent(normalized_ER_TCGA_RNAseq, ER_SET_sig)
expect_equal(ER_classes_df.default_actual, ER_classes_df.default)
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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