setup_dirs: Create standard project directories

In aappling-usgs/scipiper: Support functions for ushering data through a scientific workflow

Description

Create standard project directories

Usage

setup_dirs(
  ...,
  default = "cos",
  .list = list(`1_data` = default, `9_report` = default, lib = "")
)

Arguments

...	named characters where name=directory_name and value=character_codes_for_dirs, or unnamed characters where value=directory_name (and default will be used for character_codes_for_dirs). Permitted letters for character_codes_for_dirs are c=cfg, d=doc, j=job, o=out, and s=src
default	string identifying the default set of character_codes_for_dirs. one letter per subdirectory. Permitted letters are c=cfg, d=doc, j=job, l=log, o=out, and s=src
.list	as an alternative to ..., use .list to specify directories in a single list argument

Examples

# prep
dir.create('example_project')
setwd('example_project')

setup_dirs()
setup_dirs('2_data','3_analyze','4_report','explore'='',default='cdos')
setup_dirs('1a_siteinfo','1b_discharge','2_clean'='dos','3_model'='cjs','explore'='')

# clean up
setwd('..')
unlink('example_project', recursive=TRUE)

aappling-usgs/scipiper documentation built on Aug. 1, 2020, 3:11 p.m.