Integrate GWAS results with annotated genomic features
1 2 3 4 5 6 7 |
object |
|
risk.thresh |
the p-value threshold applied to identify “risky” markers |
adjust |
optional parameter to adjust P(R), as well as conditional probabilities for linkage disequilibrium |
effect |
assumed effect size, used to shift the ideal z-score distribution |
prob.risk |
probability of being a risk SNP, this is normally calculated automatically but can be supplied in situations where the result was 0 |
verbose |
print out intermediate statistics calculated during the analysis |
trace |
Non-negative integer. If positive, tracing information on the
progress of the optimization is produced. See |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.