We select at least 100 SNPs with FDR < 0.05 or 1000 SNPs with FDR < 0.1. If this can't be done then we use 100 SNPs but warn the estimate is ureliable.
1 | calc.threshold(p, verbose = FALSE, method = "BH")
|
p |
numeric vector of p-values (possibly with |
verbose |
print out intermediate statistics calculated during the analysis |
method |
correction method |
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